Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap2Q8VC34 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap2Q8VC34 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rpap2Q8VC34 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Gm37055-201ENSMUST00000191866 133 ntBASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Gm7791-201ENSMUST00000219066 539 ntBASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Gm5417-201ENSMUST00000079706 384 ntBASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpap2Q8VC34 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.82■□□□□ 0.6
Rpap2Q8VC34 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rpap2Q8VC34 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Gm27463-201ENSMUST00000183569 57 ntBASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpap2Q8VC34 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rpap2Q8VC34 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpap2Q8VC34 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms