Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC24.35■■□□□ 1.49
Cd109Q8R422 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cd109Q8R422 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cd109Q8R422 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Cd109Q8R422 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Cd109Q8R422 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Cd109Q8R422 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Cd109Q8R422 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Cd109Q8R422 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cd109Q8R422 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cd109Q8R422 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC24.34■■□□□ 1.49
Cd109Q8R422 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cd109Q8R422 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Cd109Q8R422 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cd109Q8R422 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Cd109Q8R422 AC124569.2-201ENSMUST00000225998 818 ntBASIC24.34■■□□□ 1.49
Cd109Q8R422 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cd109Q8R422 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cd109Q8R422 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC24.33■■□□□ 1.49
Cd109Q8R422 AC133598.3-202ENSMUST00000224219 531 ntBASIC24.33■■□□□ 1.49
Cd109Q8R422 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cd109Q8R422 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Cd109Q8R422 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cd109Q8R422 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cd109Q8R422 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC24.33■■□□□ 1.48
Cd109Q8R422 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC24.32■■□□□ 1.48
Cd109Q8R422 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Cd109Q8R422 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC24.32■■□□□ 1.48
Cd109Q8R422 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC24.32■■□□□ 1.48
Cd109Q8R422 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cd109Q8R422 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cd109Q8R422 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cd109Q8R422 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cd109Q8R422 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Cd109Q8R422 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
Cd109Q8R422 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cd109Q8R422 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cd109Q8R422 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cd109Q8R422 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cd109Q8R422 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cd109Q8R422 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC24.3■■□□□ 1.48
Cd109Q8R422 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cd109Q8R422 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cd109Q8R422 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cd109Q8R422 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Cd109Q8R422 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cd109Q8R422 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cd109Q8R422 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cd109Q8R422 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cd109Q8R422 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC24.29■■□□□ 1.48
Cd109Q8R422 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cd109Q8R422 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC24.29■■□□□ 1.48
Cd109Q8R422 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cd109Q8R422 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Cd109Q8R422 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cd109Q8R422 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC24.28■■□□□ 1.48
Cd109Q8R422 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cd109Q8R422 Gm18421-201ENSMUST00000204122 625 ntBASIC24.28■■□□□ 1.48
Cd109Q8R422 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cd109Q8R422 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cd109Q8R422 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC24.28■■□□□ 1.48
Cd109Q8R422 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cd109Q8R422 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC24.28■■□□□ 1.48
Cd109Q8R422 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cd109Q8R422 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Cd109Q8R422 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cd109Q8R422 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cd109Q8R422 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC24.27■■□□□ 1.48
Cd109Q8R422 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC24.27■■□□□ 1.48
Cd109Q8R422 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cd109Q8R422 Birc2-201ENSMUST00000054878 378 ntBASIC24.27■■□□□ 1.48
Cd109Q8R422 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cd109Q8R422 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cd109Q8R422 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cd109Q8R422 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC24.27■■□□□ 1.48
Cd109Q8R422 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cd109Q8R422 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cd109Q8R422 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
Cd109Q8R422 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
Cd109Q8R422 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
Cd109Q8R422 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Cd109Q8R422 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cd109Q8R422 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Cd109Q8R422 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms