Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Gm12350-201ENSMUST00000121208 462 ntBASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Gm2756-201ENSMUST00000195851 400 ntBASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxe1Q8R2I0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 BC021767-201ENSMUST00000126387 1716 ntBASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Gm10060-201ENSMUST00000212002 111 ntBASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxe1Q8R2I0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxe1Q8R2I0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Rprl3-201ENSMUST00000157400 290 ntBASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Rarb-207ENSMUST00000225921 2756 ntBASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxe1Q8R2I0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Foxe1Q8R2I0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms