Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Gm13216-201ENSMUST00000117145 591 ntBASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nudcd3Q8R1N4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nudcd3Q8R1N4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nudcd3Q8R1N4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nudcd3Q8R1N4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nudcd3Q8R1N4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Gm42642-201ENSMUST00000200683 355 ntBASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nudcd3Q8R1N4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms