Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Timm23-208ENSMUST00000226683 750 ntBASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf7Q8R0S1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Gm7638-201ENSMUST00000121348 967 ntBASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Gm9731-201ENSMUST00000209480 747 ntBASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf7Q8R0S1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf7Q8R0S1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Odf3b-204ENSMUST00000227834 930 ntBASIC20.22■□□□□ 0.83
Atf7Q8R0S1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf7Q8R0S1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Atf7Q8R0S1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf7Q8R0S1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf7Q8R0S1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf7Q8R0S1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Atf7Q8R0S1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.21■□□□□ 0.83
Atf7Q8R0S1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf7Q8R0S1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf7Q8R0S1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Atf7Q8R0S1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.19■□□□□ 0.82
Atf7Q8R0S1 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atf7Q8R0S1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms