Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf4Q8K4J2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Gm21956-201ENSMUST00000179946 522 ntBASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf4Q8K4J2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf4Q8K4J2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf4Q8K4J2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Gm43060-201ENSMUST00000200621 289 ntBASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ebf4Q8K4J2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.1
Ebf4Q8K4J2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ebf4Q8K4J2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ebf4Q8K4J2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ebf4Q8K4J2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms