Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.17■□□□□ 0.98
Smc4Q8CG47 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc4Q8CG47 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.16■□□□□ 0.98
Smc4Q8CG47 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc4Q8CG47 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc4Q8CG47 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smc4Q8CG47 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smc4Q8CG47 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smc4Q8CG47 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Smc4Q8CG47 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.14■□□□□ 0.97
Smc4Q8CG47 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Smc4Q8CG47 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc4Q8CG47 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc4Q8CG47 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc4Q8CG47 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Smc4Q8CG47 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc4Q8CG47 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smc4Q8CG47 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Smc4Q8CG47 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc4Q8CG47 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smc4Q8CG47 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.13■□□□□ 0.97
Smc4Q8CG47 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smc4Q8CG47 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc4Q8CG47 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc4Q8CG47 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc4Q8CG47 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Smc4Q8CG47 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Gm9013-201ENSMUST00000132939 882 ntBASIC21.11■□□□□ 0.97
Smc4Q8CG47 Gm26039-201ENSMUST00000158152 144 ntBASIC21.11■□□□□ 0.97
Smc4Q8CG47 Gm6345-202ENSMUST00000180900 204 ntBASIC21.11■□□□□ 0.97
Smc4Q8CG47 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.11■□□□□ 0.97
Smc4Q8CG47 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc4Q8CG47 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Smc4Q8CG47 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Gm11355-201ENSMUST00000121120 306 ntBASIC21.1■□□□□ 0.97
Smc4Q8CG47 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms