Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb7Q8CDY9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb7Q8CDY9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb7Q8CDY9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb7Q8CDY9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Gm10653-202ENSMUST00000139570 835 ntBASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb7Q8CDY9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb7Q8CDY9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.21■□□□□ 0.34
Pcdhb7Q8CDY9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhb7Q8CDY9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms