Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Gm3375-201ENSMUST00000203929 796 ntBASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp43Q8BUM9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp43Q8BUM9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Il3ra-202ENSMUST00000223589 738 ntBASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp43Q8BUM9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp43Q8BUM9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp43Q8BUM9 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.33■□□□□ 0.37
Usp43Q8BUM9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp43Q8BUM9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp43Q8BUM9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.33■□□□□ 0.37
Usp43Q8BUM9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp43Q8BUM9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp43Q8BUM9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.33■□□□□ 0.36
Usp43Q8BUM9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Usp43Q8BUM9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp43Q8BUM9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms