Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Zfp783-201ENSMUST00000095946 670 ntBASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ckap4Q8BMK4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ckap4Q8BMK4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Gm12441-201ENSMUST00000121806 588 ntBASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ckap4Q8BMK4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Idnk-204ENSMUST00000226010 1898 ntBASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ckap4Q8BMK4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ckap4Q8BMK4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ckap4Q8BMK4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ckap4Q8BMK4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ckap4Q8BMK4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ckap4Q8BMK4 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.21■□□□□ 0.19
Ckap4Q8BMK4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ckap4Q8BMK4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms