Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nop53Q8BK35 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nop53Q8BK35 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nop53Q8BK35 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nop53Q8BK35 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nop53Q8BK35 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nop53Q8BK35 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nop53Q8BK35 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nop53Q8BK35 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.4■□□□□ 0.54
Nop53Q8BK35 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Nop53Q8BK35 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nop53Q8BK35 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nop53Q8BK35 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Gm2559-201ENSMUST00000201323 363 ntBASIC18.39■□□□□ 0.53
Nop53Q8BK35 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nop53Q8BK35 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.38■□□□□ 0.53
Nop53Q8BK35 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Gm13401-201ENSMUST00000117074 291 ntBASIC18.38■□□□□ 0.53
Nop53Q8BK35 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nop53Q8BK35 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nop53Q8BK35 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms