Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc40Q8BI79 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc40Q8BI79 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Gm29257-201ENSMUST00000186115 639 ntBASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Gm18025-201ENSMUST00000221733 862 ntBASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc40Q8BI79 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc40Q8BI79 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Gm6576-201ENSMUST00000169678 883 ntBASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc40Q8BI79 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms