Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Dio3-201ENSMUST00000097228 1449 ntBASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Gm12441-201ENSMUST00000121806 588 ntBASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.56■□□□□ 0.24
Rnf38Q8BI21 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rnf38Q8BI21 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Gm6576-201ENSMUST00000169678 883 ntBASIC16.54■□□□□ 0.24
Rnf38Q8BI21 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rnf38Q8BI21 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.53■□□□□ 0.24
Rnf38Q8BI21 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Gm11249-201ENSMUST00000117071 859 ntBASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Gm10138-203ENSMUST00000206952 366 ntBASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rnf38Q8BI21 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.52■□□□□ 0.24
Rnf38Q8BI21 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms