Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Smndc1Q8BGT7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smndc1Q8BGT7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Gm13534-201ENSMUST00000121169 513 ntBASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Tgds-204ENSMUST00000228543 1594 ntBASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smndc1Q8BGT7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smndc1Q8BGT7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Gm27011-201ENSMUST00000182352 972 ntBASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smndc1Q8BGT7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smndc1Q8BGT7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms