Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Phf7-203ENSMUST00000226565 1971 ntBASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Rprl3-201ENSMUST00000157400 290 ntBASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Mir8112-201ENSMUST00000184382 131 ntBASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ttc28Q80XJ3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ttc28Q80XJ3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Gm12350-201ENSMUST00000121208 462 ntBASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Gm27867-201ENSMUST00000184778 125 ntBASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Gm6376-201ENSMUST00000209407 580 ntBASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Gm5364-201ENSMUST00000216789 889 ntBASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ttc28Q80XJ3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms