Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vrk1Q80X41 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Gm17808-201ENSMUST00000200859 894 ntBASIC16.36■□□□□ 0.21
Vrk1Q80X41 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vrk1Q80X41 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Gm26039-201ENSMUST00000158152 144 ntBASIC16.35■□□□□ 0.21
Vrk1Q80X41 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vrk1Q80X41 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.34■□□□□ 0.21
Vrk1Q80X41 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.34■□□□□ 0.21
Vrk1Q80X41 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.34■□□□□ 0.21
Vrk1Q80X41 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vrk1Q80X41 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vrk1Q80X41 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vrk1Q80X41 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vrk1Q80X41 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vrk1Q80X41 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vrk1Q80X41 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vrk1Q80X41 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Vrk1Q80X41 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.33■□□□□ 0.21
Vrk1Q80X41 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Vrk1Q80X41 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.33■□□□□ 0.2
Vrk1Q80X41 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.33■□□□□ 0.2
Vrk1Q80X41 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.33■□□□□ 0.2
Vrk1Q80X41 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vrk1Q80X41 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Vrk1Q80X41 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms