Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Srrm3Q80WV7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Gm11643-201ENSMUST00000119578 864 ntBASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Srrm3Q80WV7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Srrm3Q80WV7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Srrm3Q80WV7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Srrm3Q80WV7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Gm13146-201ENSMUST00000118508 780 ntBASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Gm6211-202ENSMUST00000167849 925 ntBASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.84■□□□□ 0.45
Srrm3Q80WV7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Srrm3Q80WV7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Srrm3Q80WV7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Srrm3Q80WV7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Srrm3Q80WV7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Srrm3Q80WV7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Srrm3Q80WV7 Gm13534-201ENSMUST00000121169 513 ntBASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms