Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rpap1Q80TE0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Gm29707-201ENSMUST00000196325 491 ntBASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rpap1Q80TE0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rpap1Q80TE0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC26.58■■□□□ 1.84
Rpap1Q80TE0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Rpap1Q80TE0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
Rpap1Q80TE0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Gm1818-201ENSMUST00000169406 1184 ntBASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Gm43073-201ENSMUST00000198200 1189 ntBASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Cmtm5-203ENSMUST00000227441 610 ntBASIC26.56■■□□□ 1.84
Rpap1Q80TE0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 AC153794.1-201ENSMUST00000169148 126 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44357-201ENSMUST00000195897 142 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm19658-201ENSMUST00000196231 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44367-201ENSMUST00000196836 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44350-201ENSMUST00000197197 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44390-201ENSMUST00000197533 144 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44313-201ENSMUST00000198018 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44486-201ENSMUST00000198508 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44454-201ENSMUST00000198541 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44314-201ENSMUST00000199263 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44394-201ENSMUST00000199558 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44484-201ENSMUST00000199873 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44466-201ENSMUST00000200264 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Gm44359-201ENSMUST00000200671 138 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 AC138767.1-201ENSMUST00000222661 415 ntBASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Rpap1Q80TE0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Rpap1Q80TE0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Rpap1Q80TE0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Rpap1Q80TE0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Rpap1Q80TE0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Vti1a-206ENSMUST00000225529 1244 ntBASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rpap1Q80TE0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC26.52■■□□□ 1.84
Rpap1Q80TE0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms