Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.77■□□□□ 0.6
Ush1gQ80T11 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.77■□□□□ 0.6
Ush1gQ80T11 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ush1gQ80T11 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.77■□□□□ 0.59
Ush1gQ80T11 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ush1gQ80T11 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.76■□□□□ 0.59
Ush1gQ80T11 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.76■□□□□ 0.59
Ush1gQ80T11 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Gm17807-201ENSMUST00000186869 298 ntBASIC18.76■□□□□ 0.59
Ush1gQ80T11 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ush1gQ80T11 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.75■□□□□ 0.59
Ush1gQ80T11 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Gm7370-201ENSMUST00000219471 767 ntBASIC18.75■□□□□ 0.59
Ush1gQ80T11 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ush1gQ80T11 Rarb-207ENSMUST00000225921 2756 ntBASIC18.75■□□□□ 0.59
Ush1gQ80T11 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Gm29518-201ENSMUST00000190858 372 ntBASIC18.74■□□□□ 0.59
Ush1gQ80T11 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ush1gQ80T11 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.73■□□□□ 0.59
Ush1gQ80T11 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Gm37025-201ENSMUST00000195159 829 ntBASIC18.73■□□□□ 0.59
Ush1gQ80T11 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ush1gQ80T11 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Gm9731-201ENSMUST00000209480 747 ntBASIC18.72■□□□□ 0.59
Ush1gQ80T11 Gm7213-201ENSMUST00000215977 950 ntBASIC18.72■□□□□ 0.59
Ush1gQ80T11 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ush1gQ80T11 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms