Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox11Q7M6Y2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox11Q7M6Y2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox11Q7M6Y2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Gm18115-201ENSMUST00000221209 621 ntBASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox11Q7M6Y2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox11Q7M6Y2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox11Q7M6Y2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox11Q7M6Y2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sox11Q7M6Y2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox11Q7M6Y2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Gm26039-201ENSMUST00000158152 144 ntBASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Gm27742-201ENSMUST00000184667 60 ntBASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox11Q7M6Y2 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox11Q7M6Y2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox11Q7M6Y2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms