Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Gm6376-201ENSMUST00000209407 580 ntBASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.46■□□□□ 0.71
Scn10aQ6QIY3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Gm11779-201ENSMUST00000118541 368 ntBASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scn10aQ6QIY3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Gm44430-201ENSMUST00000203376 995 ntBASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scn10aQ6QIY3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn10aQ6QIY3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Scn10aQ6QIY3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.42■□□□□ 0.7
Scn10aQ6QIY3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn10aQ6QIY3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.42■□□□□ 0.7
Scn10aQ6QIY3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn10aQ6QIY3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn10aQ6QIY3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn10aQ6QIY3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn10aQ6QIY3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Gm4995-201ENSMUST00000117247 432 ntBASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn10aQ6QIY3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scn10aQ6QIY3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn10aQ6QIY3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Scn10aQ6QIY3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms