Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NfrkbQ6PIJ4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Gm17807-201ENSMUST00000186869 298 ntBASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NfrkbQ6PIJ4 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Gm26039-201ENSMUST00000158152 144 ntBASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Gm28033-201ENSMUST00000184224 96 ntBASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NfrkbQ6PIJ4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NfrkbQ6PIJ4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NfrkbQ6PIJ4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NfrkbQ6PIJ4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NfrkbQ6PIJ4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NfrkbQ6PIJ4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NfrkbQ6PIJ4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NfrkbQ6PIJ4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NfrkbQ6PIJ4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NfrkbQ6PIJ4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms