Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarca1Q6PGB8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smarca1Q6PGB8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smarca1Q6PGB8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Smarca1Q6PGB8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarca1Q6PGB8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Smarca1Q6PGB8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.08■□□□□ 0.65
Smarca1Q6PGB8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarca1Q6PGB8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Smarca1Q6PGB8 Gm13559-201ENSMUST00000120476 863 ntBASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Gm38027-201ENSMUST00000192315 235 ntBASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Smarca1Q6PGB8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Smarca1Q6PGB8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Gm12085-201ENSMUST00000119263 940 ntBASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Gm11539-201ENSMUST00000119837 557 ntBASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Gm13436-201ENSMUST00000120418 567 ntBASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Smarca1Q6PGB8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.05■□□□□ 0.64
Smarca1Q6PGB8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Gm27463-201ENSMUST00000183569 57 ntBASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Smarca1Q6PGB8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.03■□□□□ 0.64
Smarca1Q6PGB8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms