Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim45Q6PFY8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim45Q6PFY8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim45Q6PFY8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.27■□□□□ 0.19
Trim45Q6PFY8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim45Q6PFY8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim45Q6PFY8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim45Q6PFY8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim45Q6PFY8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim45Q6PFY8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim45Q6PFY8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Gm12382-201ENSMUST00000122005 922 ntBASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim45Q6PFY8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim45Q6PFY8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim45Q6PFY8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim45Q6PFY8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim45Q6PFY8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms