Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.23■□□□□ 0.83
Nup98Q6PFD9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup98Q6PFD9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.22■□□□□ 0.83
Nup98Q6PFD9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup98Q6PFD9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.21■□□□□ 0.83
Nup98Q6PFD9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.21■□□□□ 0.83
Nup98Q6PFD9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup98Q6PFD9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.19■□□□□ 0.82
Nup98Q6PFD9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nup98Q6PFD9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nup98Q6PFD9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms