Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herc4Q6PAV2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Gm37025-201ENSMUST00000195159 829 ntBASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.95■□□□□ 0.62
Herc4Q6PAV2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herc4Q6PAV2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Herc4Q6PAV2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Mir5122-201ENSMUST00000175004 89 ntBASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.93■□□□□ 0.62
Herc4Q6PAV2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Odf3b-204ENSMUST00000227834 930 ntBASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herc4Q6PAV2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Gm7638-201ENSMUST00000121348 967 ntBASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herc4Q6PAV2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms