Protein–RNA interactions for Protein: Q6P5U8

Ccdc148, Coiled-coil domain-containing protein 148, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc148Q6P5U8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc148Q6P5U8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc148Q6P5U8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc148Q6P5U8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc148Q6P5U8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc148Q6P5U8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Gm24589-201ENSMUST00000116692 94 ntBASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc148Q6P5U8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc148Q6P5U8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc148Q6P5U8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc148Q6P5U8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc148Q6P5U8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc148Q6P5U8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.02■□□□□ 0.79
Ccdc148Q6P5U8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc148Q6P5U8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms