Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl3Q6P1Y1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rtl3Q6P1Y1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl3Q6P1Y1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Gm7889-201ENSMUST00000185591 958 ntBASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl3Q6P1Y1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Gm7791-201ENSMUST00000219066 539 ntBASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl3Q6P1Y1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Gm17661-201ENSMUST00000170317 270 ntBASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rtl3Q6P1Y1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rtl3Q6P1Y1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Rtl3Q6P1Y1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Gm6659-201ENSMUST00000174752 547 ntBASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl3Q6P1Y1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms