Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 Gm29518-201ENSMUST00000190858 372 ntBASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 Il3ra-202ENSMUST00000223589 738 ntBASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdzrn3Q69ZS0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pdzrn3Q69ZS0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Gm29791-202ENSMUST00000207888 369 ntBASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Gm9731-201ENSMUST00000209480 747 ntBASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdzrn3Q69ZS0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Gm37025-201ENSMUST00000195159 829 ntBASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Gm7213-201ENSMUST00000215977 950 ntBASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdzrn3Q69ZS0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pdzrn3Q69ZS0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdzrn3Q69ZS0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms