Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.89■□□□□ 0.29
VclQ64727 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VclQ64727 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.89■□□□□ 0.29
VclQ64727 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.89■□□□□ 0.29
VclQ64727 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VclQ64727 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
VclQ64727 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.88■□□□□ 0.29
VclQ64727 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.88■□□□□ 0.29
VclQ64727 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
VclQ64727 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Gm7638-201ENSMUST00000121348 967 ntBASIC16.88■□□□□ 0.29
VclQ64727 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.88■□□□□ 0.29
VclQ64727 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VclQ64727 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.87■□□□□ 0.29
VclQ64727 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VclQ64727 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.87■□□□□ 0.29
VclQ64727 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 Gm43799-201ENSMUST00000201845 579 ntBASIC16.87■□□□□ 0.29
VclQ64727 Gm9731-201ENSMUST00000209480 747 ntBASIC16.87■□□□□ 0.29
VclQ64727 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.87■□□□□ 0.29
VclQ64727 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VclQ64727 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VclQ64727 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VclQ64727 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VclQ64727 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VclQ64727 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VclQ64727 Gm6433-201ENSMUST00000118634 875 ntBASIC16.86■□□□□ 0.29
VclQ64727 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VclQ64727 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VclQ64727 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VclQ64727 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.85■□□□□ 0.29
VclQ64727 Gm11539-201ENSMUST00000119837 557 ntBASIC16.85■□□□□ 0.29
VclQ64727 Gm13436-201ENSMUST00000120418 567 ntBASIC16.85■□□□□ 0.29
VclQ64727 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VclQ64727 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VclQ64727 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Gm13559-201ENSMUST00000120476 863 ntBASIC16.84■□□□□ 0.29
VclQ64727 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.84■□□□□ 0.29
VclQ64727 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
VclQ64727 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.84■□□□□ 0.29
VclQ64727 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VclQ64727 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VclQ64727 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.83■□□□□ 0.29
VclQ64727 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VclQ64727 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VclQ64727 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms