Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm14494-201ENSMUST00000118786 435 ntBASIC16.24■□□□□ 0.19
AtmQ62388 Gm12644-201ENSMUST00000119935 606 ntBASIC16.24■□□□□ 0.19
AtmQ62388 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AtmQ62388 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AtmQ62388 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Gm37025-201ENSMUST00000195159 829 ntBASIC16.23■□□□□ 0.19
AtmQ62388 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
AtmQ62388 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AtmQ62388 Gm10175-201ENSMUST00000086013 645 ntBASIC16.23■□□□□ 0.19
AtmQ62388 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AtmQ62388 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AtmQ62388 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.22■□□□□ 0.19
AtmQ62388 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.22■□□□□ 0.19
AtmQ62388 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.22■□□□□ 0.19
AtmQ62388 Gm24513-201ENSMUST00000174964 138 ntBASIC16.22■□□□□ 0.19
AtmQ62388 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AtmQ62388 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.22■□□□□ 0.19
AtmQ62388 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
AtmQ62388 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.22■□□□□ 0.19
AtmQ62388 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.22■□□□□ 0.19
AtmQ62388 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.22■□□□□ 0.19
AtmQ62388 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.22■□□□□ 0.19
AtmQ62388 Gm27321-201ENSMUST00000185021 205 ntBASIC16.22■□□□□ 0.19
AtmQ62388 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.22■□□□□ 0.19
AtmQ62388 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AtmQ62388 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AtmQ62388 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AtmQ62388 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.21■□□□□ 0.19
AtmQ62388 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AtmQ62388 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AtmQ62388 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AtmQ62388 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
AtmQ62388 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AtmQ62388 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AtmQ62388 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
AtmQ62388 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
AtmQ62388 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AtmQ62388 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
AtmQ62388 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.2■□□□□ 0.18
AtmQ62388 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AtmQ62388 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.19■□□□□ 0.18
AtmQ62388 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.19■□□□□ 0.18
AtmQ62388 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
AtmQ62388 Grk6-207ENSMUST00000225925 2769 ntBASIC16.19■□□□□ 0.18
AtmQ62388 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.19■□□□□ 0.18
AtmQ62388 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.19■□□□□ 0.18
AtmQ62388 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AtmQ62388 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AtmQ62388 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AtmQ62388 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AtmQ62388 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.18■□□□□ 0.18
AtmQ62388 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.18■□□□□ 0.18
AtmQ62388 Gm27867-201ENSMUST00000184778 125 ntBASIC16.18■□□□□ 0.18
AtmQ62388 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.18■□□□□ 0.18
AtmQ62388 Gm6296-201ENSMUST00000222599 943 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms