Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdf4Q61112 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.41■□□□□ 0.38
Sdf4Q61112 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Sdf4Q61112 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Sdf4Q61112 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Gm38027-201ENSMUST00000192315 235 ntBASIC17.41■□□□□ 0.38
Sdf4Q61112 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Sdf4Q61112 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.41■□□□□ 0.38
Sdf4Q61112 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdf4Q61112 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sdf4Q61112 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sdf4Q61112 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.4■□□□□ 0.38
Sdf4Q61112 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.4■□□□□ 0.38
Sdf4Q61112 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.4■□□□□ 0.38
Sdf4Q61112 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdf4Q61112 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Gm17661-201ENSMUST00000170317 270 ntBASIC17.39■□□□□ 0.37
Sdf4Q61112 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.39■□□□□ 0.37
Sdf4Q61112 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.39■□□□□ 0.37
Sdf4Q61112 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.39■□□□□ 0.37
Sdf4Q61112 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdf4Q61112 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.38■□□□□ 0.37
Sdf4Q61112 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Sdf4Q61112 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Sdf4Q61112 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.38■□□□□ 0.37
Sdf4Q61112 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.38■□□□□ 0.37
Sdf4Q61112 Mir5122-201ENSMUST00000175004 89 ntBASIC17.38■□□□□ 0.37
Sdf4Q61112 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Sdf4Q61112 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.38■□□□□ 0.37
Sdf4Q61112 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sdf4Q61112 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sdf4Q61112 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Sdf4Q61112 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sdf4Q61112 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sdf4Q61112 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdf4Q61112 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdf4Q61112 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.37■□□□□ 0.37
Sdf4Q61112 Gm9731-201ENSMUST00000209480 747 ntBASIC17.37■□□□□ 0.37
Sdf4Q61112 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.37■□□□□ 0.37
Sdf4Q61112 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdf4Q61112 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdf4Q61112 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdf4Q61112 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdf4Q61112 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Sdf4Q61112 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sdf4Q61112 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdf4Q61112 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.37■□□□□ 0.37
Sdf4Q61112 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sdf4Q61112 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sdf4Q61112 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.36■□□□□ 0.37
Sdf4Q61112 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.36■□□□□ 0.37
Sdf4Q61112 Gm21814-202ENSMUST00000203277 873 ntBASIC17.36■□□□□ 0.37
Sdf4Q61112 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sdf4Q61112 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms