Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc88aQ5SNZ0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Mir8098-201ENSMUST00000184011 137 ntBASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc88aQ5SNZ0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Mir3081-201ENSMUST00000175305 84 ntBASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm10566-201ENSMUST00000086739 996 ntBASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc88aQ5SNZ0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm7213-201ENSMUST00000215977 950 ntBASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Birc2-201ENSMUST00000054878 378 ntBASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc88aQ5SNZ0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc88aQ5SNZ0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc88aQ5SNZ0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc88aQ5SNZ0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc88aQ5SNZ0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm27525-201ENSMUST00000184465 107 ntBASIC19.66■□□□□ 0.74
Ccdc88aQ5SNZ0 Gm37722-201ENSMUST00000193757 208 ntBASIC19.66■□□□□ 0.74
Ccdc88aQ5SNZ0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc88aQ5SNZ0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms