Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-1Q5R1I8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-1Q5R1I8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Mir3960-201ENSMUST00000198213 73 ntBASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-1Q5R1I8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-1Q5R1I8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Gm44428-201ENSMUST00000204474 874 ntBASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3-1Q5R1I8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3-1Q5R1I8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms