Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Mir8112-201ENSMUST00000184382 131 ntBASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Gm43137-201ENSMUST00000198052 594 ntBASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Gm9959-201ENSMUST00000068277 390 ntBASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-4Q5R1H9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Gm12922-201ENSMUST00000120626 809 ntBASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav7d-4Q5R1H9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-4Q5R1H9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms