Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Trav15-1-dv6-1Q5R1D2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm38285-201ENSMUST00000192928 922 ntBASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-1-dv6-1Q5R1D2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms