Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Gm16061-201ENSMUST00000122167 857 ntBASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarf1Q5ND28 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 Mir5130-201ENSMUST00000175160 84 ntBASIC18.75■□□□□ 0.59
Scarf1Q5ND28 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarf1Q5ND28 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.74■□□□□ 0.59
Scarf1Q5ND28 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Gm25007-201ENSMUST00000083808 133 ntBASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.74■□□□□ 0.59
Scarf1Q5ND28 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.73■□□□□ 0.59
Scarf1Q5ND28 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 AC154634.3-201ENSMUST00000224589 736 ntBASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarf1Q5ND28 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarf1Q5ND28 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarf1Q5ND28 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.72■□□□□ 0.59
Scarf1Q5ND28 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Scarf1Q5ND28 Gm18958-201ENSMUST00000174258 762 ntBASIC18.72■□□□□ 0.59
Scarf1Q5ND28 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarf1Q5ND28 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Scarf1Q5ND28 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.72■□□□□ 0.59
Scarf1Q5ND28 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Scarf1Q5ND28 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarf1Q5ND28 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarf1Q5ND28 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarf1Q5ND28 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.71■□□□□ 0.59
Scarf1Q5ND28 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.71■□□□□ 0.59
Scarf1Q5ND28 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarf1Q5ND28 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarf1Q5ND28 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarf1Q5ND28 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Scarf1Q5ND28 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarf1Q5ND28 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Gm18032-201ENSMUST00000222541 538 ntBASIC18.7■□□□□ 0.58
Scarf1Q5ND28 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Gm10566-201ENSMUST00000086739 996 ntBASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms