Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf43Q5NCP0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf43Q5NCP0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf43Q5NCP0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Gm24589-201ENSMUST00000116692 94 ntBASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf43Q5NCP0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Rnf43Q5NCP0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf43Q5NCP0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms