Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.94■□□□□ 0.46
Vps41Q5KU39 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vps41Q5KU39 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.93■□□□□ 0.46
Vps41Q5KU39 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.93■□□□□ 0.46
Vps41Q5KU39 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps41Q5KU39 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps41Q5KU39 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps41Q5KU39 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Flg-201ENSMUST00000050758 1488 ntBASIC17.91■□□□□ 0.46
Vps41Q5KU39 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Gm13401-201ENSMUST00000117074 291 ntBASIC17.91■□□□□ 0.46
Vps41Q5KU39 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.91■□□□□ 0.46
Vps41Q5KU39 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps41Q5KU39 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Mir2861-201ENSMUST00000175539 82 ntBASIC17.9■□□□□ 0.46
Vps41Q5KU39 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Mtag2-201ENSMUST00000058665 714 ntBASIC17.9■□□□□ 0.46
Vps41Q5KU39 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps41Q5KU39 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps41Q5KU39 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.89■□□□□ 0.45
Vps41Q5KU39 Gm10418-201ENSMUST00000100943 576 ntBASIC17.89■□□□□ 0.45
Vps41Q5KU39 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.89■□□□□ 0.45
Vps41Q5KU39 Gm13148-201ENSMUST00000118892 745 ntBASIC17.89■□□□□ 0.45
Vps41Q5KU39 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.89■□□□□ 0.45
Vps41Q5KU39 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Vps41Q5KU39 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms