Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Srrm1Q52KI8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.21■□□□□ 0.67
Srrm1Q52KI8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srrm1Q52KI8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Srrm1Q52KI8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srrm1Q52KI8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srrm1Q52KI8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srrm1Q52KI8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srrm1Q52KI8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srrm1Q52KI8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srrm1Q52KI8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Srrm1Q52KI8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.16■□□□□ 0.66
Srrm1Q52KI8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Srrm1Q52KI8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms