Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
R3hdm4Q4VBF2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Gm6433-201ENSMUST00000118634 875 ntBASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Gm7370-201ENSMUST00000219471 767 ntBASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
R3hdm4Q4VBF2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Gm9987-201ENSMUST00000069768 567 ntBASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3hdm4Q4VBF2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3hdm4Q4VBF2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Gm27000-201ENSMUST00000182943 842 ntBASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3hdm4Q4VBF2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
R3hdm4Q4VBF2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3hdm4Q4VBF2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
R3hdm4Q4VBF2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
R3hdm4Q4VBF2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms