Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx49Q4FZF3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 AW822252-206ENSMUST00000208904 237 ntBASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx49Q4FZF3 Gm25925-201ENSMUST00000158314 306 ntBASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx49Q4FZF3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Gm13884-201ENSMUST00000118103 829 ntBASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Gm15794-201ENSMUST00000120182 631 ntBASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Gm27459-201ENSMUST00000184860 107 ntBASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx49Q4FZF3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Mir8098-201ENSMUST00000184011 137 ntBASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx49Q4FZF3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx49Q4FZF3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms