Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim80Q3V061 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim80Q3V061 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim80Q3V061 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.73■□□□□ 0.43
Trim80Q3V061 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim80Q3V061 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim80Q3V061 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Rab3c-203ENSMUST00000224180 967 ntBASIC17.73■□□□□ 0.43
Trim80Q3V061 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim80Q3V061 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Haglr-201ENSMUST00000100000 2085 ntBASIC17.73■□□□□ 0.43
Trim80Q3V061 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim80Q3V061 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim80Q3V061 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.72■□□□□ 0.43
Trim80Q3V061 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim80Q3V061 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Trim80Q3V061 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim80Q3V061 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim80Q3V061 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim80Q3V061 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim80Q3V061 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim80Q3V061 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.71■□□□□ 0.43
Trim80Q3V061 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim80Q3V061 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim80Q3V061 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim80Q3V061 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim80Q3V061 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim80Q3V061 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim80Q3V061 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim80Q3V061 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim80Q3V061 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim80Q3V061 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim80Q3V061 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim80Q3V061 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Trim80Q3V061 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trim80Q3V061 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trim80Q3V061 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim80Q3V061 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim80Q3V061 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Mir7071-201ENSMUST00000184847 69 ntBASIC17.7■□□□□ 0.42
Trim80Q3V061 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim80Q3V061 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.7■□□□□ 0.42
Trim80Q3V061 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim80Q3V061 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trim80Q3V061 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim80Q3V061 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim80Q3V061 Idnk-204ENSMUST00000226010 1898 ntBASIC17.69■□□□□ 0.42
Trim80Q3V061 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim80Q3V061 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim80Q3V061 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms