Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Gm27000-201ENSMUST00000182943 842 ntBASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Rarb-207ENSMUST00000225921 2756 ntBASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.65■□□□□ 0.26
Rnf223Q3UV31 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rnf223Q3UV31 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Gm26039-201ENSMUST00000158152 144 ntBASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf223Q3UV31 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf223Q3UV31 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf223Q3UV31 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf223Q3UV31 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf223Q3UV31 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms