Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cracr2aQ3UP38 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cracr2aQ3UP38 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cracr2aQ3UP38 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.67■□□□□ 0.58
Cracr2aQ3UP38 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Mir8112-201ENSMUST00000184382 131 ntBASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Gm43799-201ENSMUST00000201845 579 ntBASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cracr2aQ3UP38 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Gm6433-201ENSMUST00000118634 875 ntBASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.65■□□□□ 0.58
Cracr2aQ3UP38 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms