Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops9Q3U898 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC11.82□□□□□ -0.52
Cops9Q3U898 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.82□□□□□ -0.52
Cops9Q3U898 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.82□□□□□ -0.52
Cops9Q3U898 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cops9Q3U898 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops9Q3U898 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cops9Q3U898 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Cops9Q3U898 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops9Q3U898 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops9Q3U898 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.82□□□□□ -0.52
Cops9Q3U898 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops9Q3U898 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops9Q3U898 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.81□□□□□ -0.52
Cops9Q3U898 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops9Q3U898 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops9Q3U898 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cops9Q3U898 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cops9Q3U898 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.81□□□□□ -0.52
Cops9Q3U898 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cops9Q3U898 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops9Q3U898 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops9Q3U898 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops9Q3U898 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cops9Q3U898 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops9Q3U898 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.8□□□□□ -0.52
Cops9Q3U898 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cops9Q3U898 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.8□□□□□ -0.52
Cops9Q3U898 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cops9Q3U898 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.8□□□□□ -0.52
Cops9Q3U898 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.8□□□□□ -0.52
Cops9Q3U898 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cops9Q3U898 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Cops9Q3U898 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops9Q3U898 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.79□□□□□ -0.52
Cops9Q3U898 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.79□□□□□ -0.52
Cops9Q3U898 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Gm11421-201ENSMUST00000122124 294 ntBASIC11.79□□□□□ -0.52
Cops9Q3U898 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.79□□□□□ -0.52
Cops9Q3U898 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC11.79□□□□□ -0.52
Cops9Q3U898 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC11.79□□□□□ -0.52
Cops9Q3U898 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cops9Q3U898 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cops9Q3U898 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.79□□□□□ -0.52
Cops9Q3U898 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cops9Q3U898 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cops9Q3U898 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cops9Q3U898 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cops9Q3U898 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cops9Q3U898 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops9Q3U898 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops9Q3U898 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cops9Q3U898 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops9Q3U898 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.78□□□□□ -0.52
Cops9Q3U898 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops9Q3U898 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cops9Q3U898 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms