Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Mmp25Q3U435 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Mmp25Q3U435 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Mmp25Q3U435 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Mmp25Q3U435 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Gm16061-201ENSMUST00000122167 857 ntBASIC16.14■□□□□ 0.17
Mmp25Q3U435 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.14■□□□□ 0.17
Mmp25Q3U435 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Gm9987-201ENSMUST00000069768 567 ntBASIC16.14■□□□□ 0.17
Mmp25Q3U435 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Mmp25Q3U435 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Gm13474-201ENSMUST00000122466 815 ntBASIC16.13■□□□□ 0.17
Mmp25Q3U435 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Gm18959-201ENSMUST00000208954 655 ntBASIC16.13■□□□□ 0.17
Mmp25Q3U435 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Mmp25Q3U435 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.12■□□□□ 0.17
Mmp25Q3U435 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp25Q3U435 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Gm18958-201ENSMUST00000174258 762 ntBASIC16.11■□□□□ 0.17
Mmp25Q3U435 Gm45058-201ENSMUST00000205810 766 ntBASIC16.11■□□□□ 0.17
Mmp25Q3U435 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp25Q3U435 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Mir5130-201ENSMUST00000175160 84 ntBASIC16.1■□□□□ 0.17
Mmp25Q3U435 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp25Q3U435 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms