Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim7Q3TJD7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdlim7Q3TJD7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pdlim7Q3TJD7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Grk6-206ENSMUST00000224995 2971 ntBASIC19.26■□□□□ 0.67
Pdlim7Q3TJD7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Pdlim7Q3TJD7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Mir8112-201ENSMUST00000184382 131 ntBASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim7Q3TJD7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.23■□□□□ 0.67
Pdlim7Q3TJD7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Gm2651-201ENSMUST00000203560 838 ntBASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim7Q3TJD7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms