Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd8Q09XV5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Chd8Q09XV5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Chd8Q09XV5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.4■□□□□ 0.06
Chd8Q09XV5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.4■□□□□ 0.06
Chd8Q09XV5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd8Q09XV5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd8Q09XV5 Gm10355-201ENSMUST00000097146 517 ntBASIC15.4■□□□□ 0.06
Chd8Q09XV5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd8Q09XV5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.4■□□□□ 0.06
Chd8Q09XV5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd8Q09XV5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Gm5312-201ENSMUST00000203728 547 ntBASIC15.39■□□□□ 0.05
Chd8Q09XV5 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.39■□□□□ 0.05
Chd8Q09XV5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd8Q09XV5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.39■□□□□ 0.05
Chd8Q09XV5 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.39■□□□□ 0.05
Chd8Q09XV5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Chd8Q09XV5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.38■□□□□ 0.05
Chd8Q09XV5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Gm37025-201ENSMUST00000195159 829 ntBASIC15.38■□□□□ 0.05
Chd8Q09XV5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd8Q09XV5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.37■□□□□ 0.05
Chd8Q09XV5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.37■□□□□ 0.05
Chd8Q09XV5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.37■□□□□ 0.05
Chd8Q09XV5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Chd8Q09XV5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC15.36■□□□□ 0.05
Chd8Q09XV5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Chd8Q09XV5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd8Q09XV5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Gm7653-201ENSMUST00000214567 508 ntBASIC15.35■□□□□ 0.05
Chd8Q09XV5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.35■□□□□ 0.05
Chd8Q09XV5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd8Q09XV5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chd8Q09XV5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.34■□□□□ 0.05
Chd8Q09XV5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd8Q09XV5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd8Q09XV5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd8Q09XV5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.34■□□□□ 0.05
Chd8Q09XV5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chd8Q09XV5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.34■□□□□ 0.05
Chd8Q09XV5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.34■□□□□ 0.05
Chd8Q09XV5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd8Q09XV5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.34■□□□□ 0.05
Chd8Q09XV5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd8Q09XV5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd8Q09XV5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd8Q09XV5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd8Q09XV5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Chd8Q09XV5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd8Q09XV5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd8Q09XV5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms