Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
Col9a1Q05722 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.83■□□□□ 0.28
Col9a1Q05722 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col9a1Q05722 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.83■□□□□ 0.28
Col9a1Q05722 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col9a1Q05722 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col9a1Q05722 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col9a1Q05722 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col9a1Q05722 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col9a1Q05722 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.83■□□□□ 0.28
Col9a1Q05722 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col9a1Q05722 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col9a1Q05722 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col9a1Q05722 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col9a1Q05722 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.82■□□□□ 0.28
Col9a1Q05722 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.82■□□□□ 0.28
Col9a1Q05722 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col9a1Q05722 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.82■□□□□ 0.28
Col9a1Q05722 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col9a1Q05722 Gm13823-201ENSMUST00000119930 345 ntBASIC16.82■□□□□ 0.28
Col9a1Q05722 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.82■□□□□ 0.28
Col9a1Q05722 Gm27628-201ENSMUST00000184911 107 ntBASIC16.82■□□□□ 0.28
Col9a1Q05722 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col9a1Q05722 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col9a1Q05722 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col9a1Q05722 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col9a1Q05722 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col9a1Q05722 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.81■□□□□ 0.28
Col9a1Q05722 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.81■□□□□ 0.28
Col9a1Q05722 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Rprl3-201ENSMUST00000157400 290 ntBASIC16.81■□□□□ 0.28
Col9a1Q05722 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.81■□□□□ 0.28
Col9a1Q05722 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Col9a1Q05722 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Col9a1Q05722 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.81■□□□□ 0.28
Col9a1Q05722 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.81■□□□□ 0.28
Col9a1Q05722 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Col9a1Q05722 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.81■□□□□ 0.28
Col9a1Q05722 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col9a1Q05722 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.8■□□□□ 0.28
Col9a1Q05722 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.8■□□□□ 0.28
Col9a1Q05722 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.8■□□□□ 0.28
Col9a1Q05722 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col9a1Q05722 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col9a1Q05722 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.8■□□□□ 0.28
Col9a1Q05722 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col9a1Q05722 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.79■□□□□ 0.28
Col9a1Q05722 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.79■□□□□ 0.28
Col9a1Q05722 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.79■□□□□ 0.28
Col9a1Q05722 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.79■□□□□ 0.28
Col9a1Q05722 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.79■□□□□ 0.28
Col9a1Q05722 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col9a1Q05722 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col9a1Q05722 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.78■□□□□ 0.28
Col9a1Q05722 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.78■□□□□ 0.28
Col9a1Q05722 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Col9a1Q05722 Mir8117-201ENSMUST00000184773 107 ntBASIC16.78■□□□□ 0.28
Col9a1Q05722 Gm37025-201ENSMUST00000195159 829 ntBASIC16.78■□□□□ 0.28
Col9a1Q05722 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.78■□□□□ 0.28
Col9a1Q05722 AC132260.2-201ENSMUST00000224482 344 ntBASIC16.78■□□□□ 0.28
Col9a1Q05722 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col9a1Q05722 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms